Systematic Entomology (2023) 48, 10-22

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Camiel Doorenweerd, Michael San Jose, Scott Geib, Julian Dupuis, Luc Leblanc, Norman Barr, Elaida Fiegalan, Kimberley Y. Morris and Daniel Rubinoff (2023)
A phylogenomic approach to species delimitation in the mango fruit fly (Bactrocera frauenfeldi) complex: A new synonym of an important pest species with variable morphotypes (Diptera: Tephritidae)
Systematic Entomology 48 (1), 10-22
Abstract: Species that are dispersed across oceanic islands can have strong population structure due to genetic isolation, which makes it difficult to determine realistic and meaningful species boundaries. This becomes especially problematic when pest species are involved, and can result in undetected new invasions. The mango fruit fly, Bactrocera frauenfeldi (Schiner), is currently considered to be one of five morphologically similar members in a monophyletic species group distributed across Southeast Asia, Australasia, and Oceania, including three major pests. We used a phylogenomic approach with highly multiplexed amplicon sequencing to test species limits and evaluate the relationships among species in the B. frauenfeldi species complex and two closely related species. We obtained sequence data from 196 specimens for 395 nuclear DNA loci, totalling 102 kb, of which 2.2 kb were parsimony informative sites. Based on morphology, biogeography, and phylogenetic analyses, we conclude that there are five distinct species in the complex in our phylogeny. Our results show that the morphological differences between B. frauenfeldi and B. albistrigata (de Meijere) are part of a continuum that cannot be phylogenetically separated into monophyletic groups. We therefore synonymize the names of two major pests: B. albistrigata syn. rev. with B. frauenfeldi, making B. frauenfeldi now recognized as a widespread pest across Australasia and Southeast Asia. We evaluated the use of COI for pest recognition and conclude that it cannot reliably distinguish between six of the seven species we studied, thus new molecular approaches will be necessary for effective management and the prevention of incursions.
(The abstract is excluded from the Creative Commons licence and has been copied with permission by the publisher.)
Link to article at publishers website
Database assignments for author(s): Scott M. Geib, Luc Leblanc

Research topic(s) for pests/diseases/weeds:
general biology - morphology - evolution


Pest and/or beneficial records:

Beneficial Pest/Disease/Weed Crop/Product Country Quarant.


Bactrocera frauenfeldi Indonesia
Bactrocera frauenfeldi Malaysia
Bactrocera frauenfeldi Papua New Guinea
Bactrocera frauenfeldi Philippines
Bactrocera frauenfeldi Thailand
Bactrocera frauenfeldi Marshall Islands
Bactrocera frauenfeldi Micronesia
Bactrocera frauenfeldi Solomon Islands
Bactrocera frauenfeldi Australia (NT+QLD)
Bactrocera psidii New Caledonia
Bactrocera kirki Fiji Islands
Bactrocera kirki French Polynesia
Bactrocera kirki Wallis and Futuna Isl.
Bactrocera trilineola New Caledonia
Bactrocera trilineola Vanuatu